Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | E0E99_03410 | Not Available | Positive | 706922 - 708304 | 49460.1 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | E0E99_03415 | Not Available | Positive | 708393 - 709622 | 47186.2 |
| energy-dependent translational throttle protein etta | E0E99_03420 | Not Available | Negative | 709723 - 711390 | 62285.3 |
| murein transglycosylase | E0E99_03425 | Not Available | Positive | 711722 - 713659 | 73433.0 |
| trp operon repressor | E0E99_03430 | Not Available | Positive | 713749 - 714075 | 12466.0 |
| non-canonical purine ntp phosphatase | E0E99_03435 | Not Available | Negative | 714131 - 714646 | 18609.1 |
| phosphoglycerate mutase gpmb | E0E99_03440 | Not Available | Positive | 714699 - 715346 | 23907.5 |
| mdr efflux pump acrab transcriptional activator roba | E0E99_03445 | Not Available | Negative | 715343 - 716212 | 33125.8 |
| protein crea | E0E99_03450 | Not Available | Positive | 716424 - 716897 | 17067.7 |
| two-component system response regulator creb | E0E99_03455 | Not Available | Positive | 716910 - 717599 | 26274.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

