Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjjw family glycine radical enzyme activase | E0E99_03360 | Not Available | Negative | 697012 - 697875 | 31644.3 |
| yjji family glycine radical enzyme | E0E99_03365 | Not Available | Negative | 697847 - 699397 | 57890.1 |
| deoxyribose-phosphate aldolase | E0E99_03370 | Not Available | Positive | 699641 - 700438 | 28371.1 |
| thymidine phosphorylase | E0E99_03375 | Not Available | Positive | 700551 - 701873 | 47015.7 |
| phosphopentomutase | E0E99_03380 | Not Available | Positive | 701925 - 703148 | 44237.3 |
| purine-nucleoside phosphorylase | E0E99_03385 | Not Available | Positive | 703252 - 703971 | 25980.5 |
| lipoate--protein ligase lpla | E0E99_03390 | Not Available | Negative | 704122 - 705138 | 37939.8 |
| ytjb family periplasmic protein | E0E99_03395 | Not Available | Negative | 705185 - 705826 | 23924.1 |
| phosphoserine phosphatase | E0E99_03400 | Not Available | Positive | 705794 - 705907 | 4110.99 |
| phosphoserine phosphatase | E0E99_03405 | Not Available | Positive | 705942 - 706910 | 35020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

