Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | E0E99_03160 | Not Available | Positive | 659794 - 660756 | 36401.8 |
| plp-dependent aminotransferase family protein | E0E99_03165 | Not Available | Negative | 660808 - 662220 | 52620.2 |
| duf1127 domain-containing protein | E0E99_03170 | Not Available | Positive | 662398 - 662562 | 6688.15 |
| marr family transcriptional regulator | E0E99_03175 | Not Available | Positive | 662710 - 663174 | 17720.4 |
| hlyd family secretion protein | E0E99_03180 | Not Available | Positive | 663181 - 664248 | 39705.1 |
| duf2955 domain-containing protein | E0E99_03185 | Not Available | Positive | 664238 - 665290 | 38926.9 |
| gtpase | E0E99_03190 | Not Available | Negative | 665341 - 666297 | 35652.7 |
| ybdd/yjix family protein | E0E99_03195 | Not Available | Negative | 666310 - 666504 | 7361.72 |
| carbon starvation protein a | E0E99_03200 | Not Available | Negative | 666615 - 668765 | 77211.3 |
| methyl-accepting chemotaxis protein | E0E99_03205 | Not Available | Positive | 669131 - 670792 | 60065.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

