Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgg | E0E99_03000 | Not Available | Negative | 626927 - 627760 | 30530.0 |
| curli production assembly/transport protein csgf | E0E99_03005 | Not Available | Negative | 627786 - 628199 | 14851.5 |
| curli production assembly/transport protein csge | E0E99_03010 | Not Available | Negative | 628225 - 628617 | 14801.4 |
| transcriptional regulator csgd | E0E99_03015 | Not Available | Negative | 628622 - 629272 | 24877.8 |
| type vi secretion system tube protein hcp | E0E99_03025 | Not Available | Negative | 630163 - 630642 | 17446.9 |
| hypothetical protein | E0E99_03030 | Not Available | Negative | 630645 - 630992 | 12890.5 |
| endoribonuclease syme | E0E99_03035 | Not Available | Negative | 631403 - 631765 | 13373.3 |
| tyrosine phenol-lyase | E0E99_03040 | Not Available | Positive | 632544 - 633914 | 51546.9 |
| tryptophan permease | E0E99_03045 | Not Available | Positive | 634104 - 635369 | 45307.6 |
| pyridoxal kinase pdxy | E0E99_03050 | Not Available | Positive | 635381 - 636238 | 31786.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

