Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_02885 | Not Available | Negative | 604761 - 604988 | 8678.06 |
| nad(p)h:quinone oxidoreductase | E0E99_02890 | Not Available | Negative | 605009 - 605605 | 20897.9 |
| stress-induced protein | E0E99_02895 | Not Available | Positive | 605992 - 606165 | 5937.62 |
| dmt family transporter | E0E99_02900 | Not Available | Positive | 606327 - 607241 | 32073.4 |
| hth-type transcriptional regulator rutr | E0E99_02905 | Not Available | Positive | 607300 - 607938 | 23896.2 |
| lysozyme inhibitor lpri family protein | E0E99_02910 | Not Available | Negative | 607935 - 608330 | 14025.7 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | E0E99_02915 | Not Available | Negative | 608390 - 612352 | 143926.0 |
| sodium/proline symporter putp | E0E99_02920 | Not Available | Positive | 612775 - 614283 | 54491.5 |
| ftr1 family protein | E0E99_02925 | Not Available | Positive | 614496 - 615329 | 30497.0 |
| iron uptake system protein efeo | E0E99_02930 | Not Available | Positive | 615388 - 616515 | 40957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

