Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrodomain ter protein matp | E0E99_02630 | Not Available | Positive | 559604 - 560056 | 17803.6 |
| porin ompa | E0E99_02635 | Not Available | Negative | 560145 - 561203 | 37890.5 |
| cell division inhibitor sula | E0E99_02640 | Not Available | Negative | 561561 - 562070 | 18782.5 |
| tfox family dna transformation protein | E0E99_02645 | Not Available | Positive | 562288 - 562902 | 23227.9 |
| tigr01666 family membrane protein | E0E99_02650 | Not Available | Negative | 562880 - 565033 | 81334.8 |
| yccf domain-containing protein | E0E99_02655 | Not Available | Negative | 565052 - 565498 | 16393.5 |
| dna helicase iv | E0E99_02660 | Not Available | Positive | 565624 - 567678 | 77632.0 |
| methylglyoxal synthase | E0E99_02665 | Not Available | Negative | 567711 - 568169 | 16885.5 |
| duf2057 family protein | E0E99_02670 | Not Available | Negative | 568263 - 568925 | 24696.5 |
| coa-binding protein | E0E99_02675 | Not Available | Positive | 569098 - 569511 | 14736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

