Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | E0E99_02430 | Not Available | Positive | 508190 - 509473 | 45991.3 |
| (d)cmp kinase | E0E99_02435 | Not Available | Positive | 509645 - 510328 | 24883.9 |
| 30s ribosomal protein s1 | E0E99_02440 | Not Available | Positive | 510442 - 512115 | 61159.5 |
| integration host factor subunit beta | E0E99_02445 | Not Available | Positive | 512275 - 512559 | 10617.8 |
| comec family protein | E0E99_02450 | Not Available | Positive | 512766 - 515030 | 84571.9 |
| lipid a abc transporter atp-binding protein/permease msba | E0E99_02455 | Not Available | Positive | 515067 - 516815 | 64434.6 |
| tetraacyldisaccharide 4'-kinase | E0E99_02460 | Not Available | Positive | 516812 - 517789 | 35179.8 |
| winged helix-turn-helix domain-containing protein | E0E99_02465 | Not Available | Positive | 517831 - 519063 | 47734.4 |
| protein ycar | E0E99_02470 | Not Available | Positive | 519115 - 519297 | 6839.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | E0E99_02475 | Not Available | Positive | 519294 - 520040 | 27562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

