Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | E0E99_01975 | Not Available | Negative | 420617 - 421516 | 34465.5 |
| n-acetylmuramoyl-l-alanine amidase amia | E0E99_01980 | Not Available | Negative | 421519 - 422388 | 31349.8 |
| gnat family acetyltransferase | E0E99_01985 | Not Available | Positive | 422601 - 423026 | 16366.6 |
| duf2919 domain-containing protein | E0E99_01990 | Not Available | Positive | 423013 - 423462 | 17001.2 |
| rpoe-regulated lipoprotein | E0E99_01995 | Not Available | Positive | 423522 - 424097 | 20660.3 |
| dyp-type peroxidase | E0E99_02000 | Not Available | Positive | 424191 - 425090 | 33112.2 |
| sdr family oxidoreductase ucpa | E0E99_02005 | Not Available | Positive | 425263 - 426054 | 27955.7 |
| sulfate abc transporter substrate-binding protein | E0E99_02010 | Not Available | Positive | 426212 - 427228 | 37750.9 |
| sulfate/thiosulfate abc transporter permease cyst | E0E99_02015 | Not Available | Positive | 427229 - 428062 | 30284.6 |
| sulfate/thiosulfate abc transporter permease cysw | E0E99_02020 | Not Available | Positive | 428062 - 428937 | 32356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

