Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_01775 | Not Available | Positive | 379246 - 379905 | 23436.7 |
| hypothetical protein | E0E99_01780 | Not Available | Positive | 379907 - 380368 | 16024.4 |
| beta-aspartyl-peptidase | E0E99_01785 | Not Available | Positive | 380380 - 381543 | 41136.8 |
| thioredoxin-dependent thiol peroxidase | E0E99_01790 | Not Available | Negative | 381697 - 382167 | 17625.9 |
| glycine cleavage system transcriptional repressor | E0E99_01795 | Not Available | Negative | 382167 - 382805 | 23238.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E0E99_01800 | Not Available | Positive | 382885 - 383763 | 31289.0 |
| outer membrane protein assembly factor bamc | E0E99_01805 | Not Available | Positive | 383780 - 384814 | 36872.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E0E99_01810 | Not Available | Positive | 384926 - 385639 | 27012.6 |
| neutral zinc metallopeptidase | E0E99_01815 | Not Available | Positive | 385768 - 386634 | 31358.8 |
| trna(met) cytidine acetyltransferase | E0E99_01820 | Not Available | Positive | 386650 - 388665 | 74232.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

