Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | E0E99_01470 | Not Available | Positive | 310222 - 310899 | 25061.0 |
| secretion protein hlyd | E0E99_01475 | Not Available | Positive | 310896 - 311891 | 36211.7 |
| abc transporter atp-binding protein | E0E99_01480 | Not Available | Positive | 311884 - 313620 | 62938.2 |
| abc transporter permease | E0E99_01485 | Not Available | Positive | 313613 - 314746 | 42201.5 |
| abc transporter permease | E0E99_01490 | Not Available | Positive | 314757 - 315863 | 41442.2 |
| hypothetical protein | E0E99_01495 | Not Available | Negative | 315825 - 316235 | 15362.5 |
| endonuclease/exonuclease/phosphatase family protein | E0E99_01500 | Not Available | Positive | 316367 - 317128 | 28578.1 |
| cardiolipin synthase clsb | E0E99_01505 | Not Available | Positive | 317125 - 318366 | 47629.2 |
| upf0104 family protein | E0E99_01510 | Not Available | Positive | 318366 - 319328 | 36192.8 |
| bax inhibitor-1/ycca family protein | E0E99_01515 | Not Available | Negative | 319429 - 320133 | 26046.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

