Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | E0E99_27040 | Not Available | Positive | 5386405 - 5386971 | 21554.7 |
| is5-like element iskpn26 family transposase | E0E99_27045 | Not Available | Positive | 5386972 - 5387538 | 21498.8 |
| Trna-glu | Not Available | Not Available | Positive | 5387845 - 5387920 | Not Available |
| is5-like element iskpn26 family transposase | E0E99_27060 | Not Available | Positive | 5388123 - 5388549 | 16736.4 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | E0E99_27065 | Not Available | Positive | 5388550 - 5388618 | 2566.14 |
| type i toxin-antitoxin system hok family toxin | E0E99_27070 | Not Available | Positive | 5388690 - 5388848 | 6179.76 |
| histidine phosphatase family protein | E0E99_27075 | Not Available | Positive | 5389034 - 5389503 | 17674.2 |
| is3 family transposase | E0E99_27090 | Not Available | Negative | 5390859 - 5391299 | 16454.3 |
| dna methylase n-4/n-6 domain protein | E0E99_27100 | Not Available | Positive | 5391838 - 5392038 | 7512.28 |
| is5/is1182 family transposase | E0E99_27115 | Not Available | Negative | 5393050 - 5393290 | 9530.86 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

