Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | E0E99_26965 | Not Available | Positive | 5379883 - 5380041 | 6206.79 |
| hypothetical protein | E0E99_26970 | Not Available | Positive | 5380084 - 5380263 | 5913.15 |
| Trna-ile | Not Available | Not Available | Positive | 5380722 - 5380798 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5380904 - 5380979 | Not Available |
| sugar translocase | E0E99_26995 | Not Available | Positive | 5381290 - 5381577 | 10312.8 |
| glycosyltransferase | E0E99_27000 | Not Available | Positive | 5381574 - 5381992 | 15693.8 |
| glycosyltransferase | E0E99_27010 | Not Available | Negative | 5382698 - 5383335 | 23877.6 |
| polymerase | E0E99_27015 | Not Available | Positive | 5383390 - 5383966 | 22188.8 |
| is6-like element is26 family transposase | E0E99_27020 | Not Available | Positive | 5384653 - 5385202 | 22265.9 |
| Trna-glu | Not Available | Not Available | Positive | 5386127 - 5386202 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

