Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-heme ferritin-like protein | E0E99_26895 | Not Available | Positive | 5366985 - 5367485 | 19032.6 |
| hypothetical protein | E0E99_26900 | Not Available | Positive | 5367870 - 5368064 | 7158.83 |
| duf2726 domain-containing protein | E0E99_26905 | Not Available | Negative | 5368170 - 5368748 | 22291.2 |
| is1 family transposase | E0E99_26910 | Not Available | Positive | 5368781 - 5368979 | 7166.52 |
| inovirus gp2 family protein | E0E99_26915 | Not Available | Positive | 5369164 - 5369895 | 27941.3 |
| is3 family transposase | E0E99_26935 | Not Available | Negative | 5373284 - 5373456 | 6525.75 |
| elongation factor tu | E0E99_26940 | Not Available | Negative | 5373457 - 5374481 | 37721.4 |
| glycosyltransferase | E0E99_26950 | Not Available | Positive | 5376396 - 5377033 | 23854.3 |
| glycosyltransferase | E0E99_26955 | Not Available | Negative | 5377273 - 5378049 | 29198.0 |
| hypothetical protein | E0E99_26960 | Not Available | Positive | 5378109 - 5378935 | 27719.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

