Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | E0E99_26845 | Not Available | Negative | 5360430 - 5361452 | 37704.6 |
| is110-like element is5708 family transposase | E0E99_26850 | Not Available | Negative | 5361799 - 5362821 | 37526.4 |
| is1 family transposase | E0E99_26855 | Not Available | Positive | 5362905 - 5363091 | 7368.04 |
| hemolysin expression modulator hha | E0E99_26860 | Not Available | Negative | 5363189 - 5363398 | 8366.02 |
| hypothetical protein | E0E99_26865 | Not Available | Positive | 5363392 - 5363586 | 6776.3 |
| hypothetical protein | E0E99_26870 | Not Available | Negative | 5363759 - 5363971 | 8395.96 |
| is6 family transposase | E0E99_26875 | Not Available | Negative | 5364058 - 5364132 | 2724.26 |
| is3 family transposase | E0E99_26880 | Not Available | Positive | 5364204 - 5365330 | 43297.1 |
| is30-like element iscfr4 family transposase | E0E99_26885 | Not Available | Negative | 5365369 - 5366529 | 44419.4 |
| is6 family transposase | E0E99_26890 | Not Available | Positive | 5366584 - 5366658 | 2724.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

