Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_26790 | Not Available | Positive | 5347643 - 5349360 | 59312.0 |
| agmatine deiminase family protein | E0E99_26795 | Not Available | Negative | 5349890 - 5351002 | 40562.0 |
| hypothetical protein | E0E99_26800 | Not Available | Positive | 5351491 - 5352528 | 39808.2 |
| transposase | E0E99_26805 | Not Available | Negative | 5352651 - 5352718 | 2250.54 |
| is110 family transposase | E0E99_26810 | Not Available | Positive | 5352943 - 5354301 | 50819.9 |
| hypothetical protein | E0E99_26815 | Not Available | Positive | 5354322 - 5355913 | 54492.5 |
| hypothetical protein | E0E99_26820 | Not Available | Positive | 5356518 - 5356955 | 16666.6 |
| hypothetical protein | E0E99_26825 | Not Available | Negative | 5357468 - 5358052 | 22202.8 |
| is5 family transposase | E0E99_26835 | Not Available | Positive | 5358770 - 5359230 | 17140.4 |
| is3 family transposase | E0E99_26840 | Not Available | Negative | 5359990 - 5360162 | 6502.71 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

