Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_26675 | Not Available | Positive | 5332627 - 5332830 | 6995.54 |
| is4-like element is421 family transposase | E0E99_26680 | Not Available | Positive | 5332911 - 5334023 | 40911.1 |
| hypothetical protein | E0E99_26690 | Not Available | Positive | 5334886 - 5335062 | 6663.16 |
| hsdr | E0E99_26695 | Not Available | Positive | 5335082 - 5336176 | 41324.6 |
| hypothetical protein | E0E99_26700 | Not Available | Negative | 5336627 - 5336890 | 9599.46 |
| is6 family transposase | E0E99_26705 | Not Available | Negative | 5336896 - 5337002 | 3878.79 |
| is66 family insertion sequence hypothetical protein | E0E99_26715 | Not Available | Negative | 5338228 - 5338575 | 12797.9 |
| is66 family insertion sequence hypothetical protein | E0E99_26720 | Not Available | Negative | 5338572 - 5338976 | 15193.4 |
| dj-1/pfpi family protein | E0E99_26730 | Not Available | Positive | 5339423 - 5339986 | 20449.4 |
| class i sam-dependent methyltransferase | E0E99_26735 | Not Available | Negative | 5340043 - 5340789 | 27574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

