Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1845 domain-containing protein | E0E99_26465 | Not Available | Positive | 5300415 - 5301161 | 28078.8 |
| is1 family transposase | E0E99_26475 | Not Available | Positive | 5301572 - 5301965 | 15465.8 |
| hypothetical protein | E0E99_26480 | Not Available | Negative | 5302010 - 5302198 | 7302.68 |
| hypothetical protein | E0E99_26485 | Not Available | Negative | 5302234 - 5303424 | 45233.2 |
| hypothetical protein | E0E99_26490 | Not Available | Negative | 5303537 - 5303938 | 14446.0 |
| hypothetical protein | E0E99_26495 | Not Available | Positive | 5304096 - 5304602 | 19324.2 |
| hnh endonuclease | E0E99_26510 | Not Available | Negative | 5305958 - 5307466 | 56722.7 |
| hypothetical protein | E0E99_26515 | Not Available | Negative | 5307640 - 5308809 | 42746.3 |
| nucleotidyltransferase | E0E99_26520 | Not Available | Positive | 5309424 - 5309714 | 10318.5 |
| duf86 domain-containing protein | E0E99_26525 | Not Available | Positive | 5309711 - 5310112 | 15263.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

