Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | E0E99_26405 | Not Available | Negative | 5287066 - 5289258 | 81557.0 |
| hypothetical protein | E0E99_26415 | Not Available | Negative | 5292101 - 5292379 | 10324.9 |
| type ii toxin-antitoxin system rele/pare family toxin | E0E99_26420 | Not Available | Positive | 5292600 - 5292929 | 12493.4 |
| xre family transcriptional regulator | E0E99_26425 | Not Available | Positive | 5292910 - 5293191 | 10972.2 |
| is1 family transposase | E0E99_26430 | Not Available | Positive | 5293525 - 5293711 | 7368.04 |
| hth-type transcriptional regulator malt | E0E99_26440 | Not Available | Negative | 5294514 - 5297219 | 103041.0 |
| is1 family transposase | E0E99_26445 | Not Available | Positive | 5297548 - 5297619 | 2357.77 |
| hypothetical protein | E0E99_26450 | Not Available | Negative | 5297671 - 5298435 | 28501.8 |
| hypothetical protein | E0E99_26455 | Not Available | Negative | 5298802 - 5299302 | 19047.5 |
| nickase | E0E99_26460 | Not Available | Negative | 5299365 - 5299976 | 22454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

