Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-specific permease | E0E99_26240 | Not Available | Negative | 5263717 - 5265186 | 53657.1 |
| lysr family transcriptional regulator | E0E99_26245 | Not Available | Negative | 5265382 - 5266263 | 32653.5 |
| multidrug efflux smr transporter | E0E99_26250 | Not Available | Positive | 5266753 - 5267103 | 12880.4 |
| multidrug efflux smr transporter | E0E99_26255 | Not Available | Positive | 5267100 - 5267429 | 12068.4 |
| choline trimethylamine-lyase | E0E99_26260 | Not Available | Positive | 5267443 - 5269821 | 89435.9 |
| glycyl-radical enzyme activating protein | E0E99_26265 | Not Available | Positive | 5269784 - 5270758 | 35443.7 |
| is1 family transposase | E0E99_26270 | Not Available | Positive | 5270939 - 5271137 | 7108.49 |
| udp-n-acetylmuramate dehydrogenase | E0E99_26280 | Not Available | Positive | 5271653 - 5272681 | 37940.3 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | E0E99_26285 | Not Available | Positive | 5272678 - 5273640 | 35225.8 |
| type i pantothenate kinase | E0E99_26290 | Not Available | Negative | 5273672 - 5274622 | 36190.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

