Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response regulator transcription factor cpxr | E0E99_26175 | Not Available | Negative | 5253857 - 5254555 | 26341.8 |
| cell-envelope stress modulator cpxp | E0E99_26180 | Not Available | Positive | 5254706 - 5255206 | 18918.4 |
| hypothetical protein | E0E99_26185 | Not Available | Negative | 5255413 - 5255772 | 13343.1 |
| type iv secretion protein rhs | E0E99_26190 | Not Available | Negative | 5255769 - 5256332 | 22319.3 |
| deda family protein | E0E99_26195 | Not Available | Negative | 5256835 - 5257344 | 18593.5 |
| dini family protein | E0E99_26200 | Not Available | Negative | 5257519 - 5257761 | 9265.2 |
| dna polymerase v | E0E99_26205 | Not Available | Positive | 5257840 - 5258073 | 8316.99 |
| arsenical resistance protein arsh | E0E99_26210 | Not Available | Negative | 5258150 - 5258848 | 26304.5 |
| transcriptional regulator | E0E99_26215 | Not Available | Positive | 5258934 - 5259254 | 12108.9 |
| arsenate reductase (glutaredoxin) | E0E99_26225 | Not Available | Positive | 5260590 - 5261015 | 15977.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

