Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | E0E99_26065 | Not Available | Positive | 5228524 - 5229513 | 36487.8 |
| heat shock protein hslj | E0E99_26070 | Not Available | Positive | 5229626 - 5230045 | 15143.6 |
| duf333 domain-containing protein | E0E99_26075 | Not Available | Negative | 5230059 - 5230325 | 8745.49 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | E0E99_26080 | Not Available | Positive | 5230600 - 5234124 | 128725.0 |
| slipin family protein | E0E99_26085 | Not Available | Positive | 5234687 - 5235814 | 41977.0 |
| nucleotidyltransferase domain-containing protein | E0E99_26090 | Not Available | Positive | 5235820 - 5236605 | 30402.5 |
| lysine-sensitive aspartokinase 3 | E0E99_26095 | Not Available | Negative | 5236648 - 5237997 | 48522.6 |
| glucose-6-phosphate isomerase | E0E99_26100 | Not Available | Positive | 5238312 - 5239961 | 61317.8 |
| glycosyltransferase | E0E99_26105 | Not Available | Positive | 5240158 - 5240783 | 23509.9 |
| hypothetical protein | E0E99_26110 | Not Available | Positive | 5240786 - 5242261 | 54465.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

