Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_26005 | Not Available | Positive | 5218560 - 5218937 | 13832.6 |
| aaa family atpase | E0E99_26010 | Not Available | Positive | 5218997 - 5220076 | 39636.5 |
| duf3150 domain-containing protein | E0E99_26015 | Not Available | Positive | 5220136 - 5221491 | 48683.6 |
| is1 family transposase | E0E99_26025 | Not Available | Negative | 5221996 - 5222194 | 7108.49 |
| serine dehydratase subunit alpha family protein | E0E99_26035 | Not Available | Negative | 5222851 - 5224128 | 45142.5 |
| abc transporter | E0E99_26040 | Not Available | Negative | 5224476 - 5225117 | 23536.3 |
| mce family protein | E0E99_26045 | Not Available | Negative | 5225117 - 5226055 | 34122.8 |
| abc transporter atp-binding protein | E0E99_26050 | Not Available | Negative | 5226057 - 5226857 | 28405.7 |
| abc transporter permease | E0E99_26055 | Not Available | Negative | 5226854 - 5227999 | 41191.3 |
| hypothetical protein | E0E99_26060 | Not Available | Negative | 5228113 - 5228364 | 8787.73 |
Pathways
318 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

