Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trab | E0E99_25795 | Not Available | Negative | 5179091 - 5180500 | 49036.6 |
| type-f conjugative transfer system secretin trak | E0E99_25800 | Not Available | Negative | 5180497 - 5181237 | 26841.8 |
| conjugal transfer protein trae | E0E99_25805 | Not Available | Negative | 5181249 - 5181833 | 21610.1 |
| type iv conjugative transfer system protein tral | E0E99_25810 | Not Available | Negative | 5181839 - 5182141 | 11765.3 |
| conjugal transfer protein traa | E0E99_25815 | Not Available | Negative | 5182144 - 5182497 | 12699.0 |
| arc family dna-binding protein | E0E99_25820 | Not Available | Positive | 5182696 - 5183337 | 24855.0 |
| conjugal transfer protein | E0E99_25825 | Not Available | Negative | 5183369 - 5183761 | 14632.3 |
| lytic transglycosylase | E0E99_25830 | Not Available | Positive | 5184416 - 5184949 | 19713.8 |
| duf945 domain-containing protein | E0E99_25835 | Not Available | Negative | 5184979 - 5185800 | 31398.5 |
| hypothetical protein | E0E99_25840 | Not Available | Negative | 5185812 - 5186105 | 10722.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

