Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | E0E99_25745 | Not Available | Positive | 5165652 - 5168624 | 111065.0 |
| transcriptional regulator tdca | E0E99_25750 | Not Available | Positive | 5168881 - 5169819 | 34769.1 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | E0E99_25755 | Not Available | Positive | 5169918 - 5170907 | 35057.4 |
| threonine/serine transporter tdcc | E0E99_25760 | Not Available | Positive | 5170930 - 5172261 | 48833.7 |
| propionate kinase | E0E99_25765 | Not Available | Positive | 5172293 - 5173501 | 43574.0 |
| formate c-acetyltransferase | E0E99_25770 | Not Available | Positive | 5173530 - 5175824 | 86032.5 |
| enamine/imine deaminase | E0E99_25775 | Not Available | Positive | 5175838 - 5176233 | 14153.0 |
| l-serine ammonia-lyase | E0E99_25780 | Not Available | Positive | 5176321 - 5177685 | 48357.2 |
| type iv conjugative transfer system protein trav | E0E99_25785 | Not Available | Negative | 5177943 - 5178500 | 19358.0 |
| hypothetical protein | E0E99_25790 | Not Available | Negative | 5178582 - 5179082 | 19707.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

