Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenylcysteine carboxylmethyltransferase family protein | E0E99_25615 | Not Available | Positive | 5146959 - 5147423 | 17554.1 |
| Trna-thr | Not Available | Not Available | Positive | 5147588 - 5147663 | Not Available |
| tn3 family transposase | E0E99_25625 | Not Available | Negative | 5148233 - 5151271 | 114471.0 |
| resolvase | E0E99_25630 | Not Available | Positive | 5151439 - 5152080 | 24741.5 |
| sulfite exporter taue/safe family protein | E0E99_25635 | Not Available | Positive | 5152195 - 5153007 | 28625.7 |
| lysr family transcriptional regulator | E0E99_25640 | Not Available | Positive | 5153027 - 5153398 | 13395.2 |
| formylmethanofuran dehydrogenase | E0E99_25655 | Not Available | Positive | 5155401 - 5156024 | 22855.8 |
| sulfite exporter taue/safe family protein | E0E99_25660 | Not Available | Positive | 5156034 - 5156774 | 25485.2 |
| conjugal transfer protein trax | E0E99_25680 | Not Available | Positive | 5159177 - 5159929 | 27906.4 |
| hypothetical protein | E0E99_25685 | Not Available | Positive | 5160027 - 5160323 | 11446.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

