Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,5-didehydrogluconate reductase dkgb | E0E99_25565 | Not Available | Negative | 5136389 - 5137192 | 29066.0 |
| Trna-asp | Not Available | Not Available | Positive | 5137357 - 5137433 | Not Available |
| fimbrial protein | E0E99_25575 | Not Available | Positive | 5137498 - 5138058 | 19176.7 |
| hypothetical protein | E0E99_25580 | Not Available | Positive | 5138111 - 5138788 | 24824.9 |
| fimbrial biogenesis outer membrane usher protein | E0E99_25585 | Not Available | Positive | 5138847 - 5141339 | 91278.0 |
| fimbrial protein | E0E99_25590 | Not Available | Positive | 5141344 - 5142960 | 57773.1 |
| molecular chaperone | E0E99_25595 | Not Available | Positive | 5142957 - 5143652 | 26326.8 |
| winged helix family transcriptional regulator | E0E99_25600 | Not Available | Positive | 5143797 - 5144528 | 27121.2 |
| hypothetical protein | E0E99_25605 | Not Available | Positive | 5144503 - 5144976 | 17875.8 |
| eal domain-containing protein | E0E99_25610 | Not Available | Positive | 5145318 - 5146766 | 55449.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

