Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail completion protein | E0E99_15510 | Not Available | Positive | 3186088 - 3186795 | 26465.7 |
| Tail sheath | E0E99_15515 | Not Available | Positive | 3186792 - 3187919 | 40577.4 |
| Putative tail tube protein | E0E99_15520 | Not Available | Positive | 3187916 - 3188371 | 16142.2 |
| Holin | E0E99_15525 | Not Available | Positive | 3188382 - 3188684 | 10557.1 |
| M15 family peptidase | E0E99_15530 | Not Available | Positive | 3188671 - 3189012 | 12866.0 |
| Hypothetical protein | E0E99_15535 | Not Available | Positive | 3189012 - 3189392 | 13982.6 |
| Hypothetical protein | E0E99_15540 | Not Available | Positive | 3189322 - 3189510 | 7039.41 |
| Hypothetical protein | E0E99_15545 | Not Available | Positive | 3189497 - 3189754 | 9504.62 |
| Tail tape measure protein | E0E99_15550 | Not Available | Positive | 3189942 - 3192002 | 73057.4 |
| Hypothetical protein | E0E99_15555 | Not Available | Positive | 3191999 - 3192328 | 12223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

