Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugation system sos inhibitor psib | E0E99_25465 | Not Available | Positive | 5121550 - 5121984 | 16052.5 |
| plasmid sos inhibition protein a | E0E99_25470 | Not Available | Positive | 5121981 - 5122703 | 27963.7 |
| theronine dehydrogenase | E0E99_25475 | Not Available | Positive | 5122706 - 5123032 | 12751.2 |
| type ii toxin-antitoxin system mrna interferase rele | E0E99_25480 | Not Available | Negative | 5123310 - 5123597 | 11225.8 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | E0E99_25485 | Not Available | Negative | 5123597 - 5123836 | 9072.01 |
| hypothetical protein | E0E99_25490 | Not Available | Positive | 5123861 - 5124055 | 7519.27 |
| cation transporter | E0E99_25495 | Not Available | Negative | 5124099 - 5125022 | 33540.8 |
| cytochrome b/b6 domain-containing protein | E0E99_25500 | Not Available | Negative | 5125222 - 5125794 | 21526.6 |
| transcriptional regulator | E0E99_25505 | Not Available | Positive | 5126470 - 5127258 | 29378.7 |
| hypothetical protein | E0E99_25510 | Not Available | Positive | 5127260 - 5127778 | 19326.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

