Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_25415 | Not Available | Negative | 5113950 - 5114291 | 13215.0 |
| hypothetical protein | E0E99_25420 | Not Available | Positive | 5114710 - 5115240 | 20170.1 |
| hypothetical protein | E0E99_25425 | Not Available | Positive | 5115394 - 5115621 | 8392.05 |
| hypothetical protein | E0E99_25430 | Not Available | Positive | 5115715 - 5115942 | 8393.56 |
| duf3560 domain-containing protein | E0E99_25435 | Not Available | Positive | 5115999 - 5117381 | 52966.4 |
| class i sam-dependent methyltransferase | E0E99_25440 | Not Available | Positive | 5117428 - 5117991 | 20615.9 |
| hypothetical protein | E0E99_25445 | Not Available | Positive | 5118124 - 5118366 | 8667.36 |
| hypothetical protein | E0E99_25450 | Not Available | Positive | 5118742 - 5119017 | 10304.2 |
| hypothetical protein | E0E99_25455 | Not Available | Positive | 5119062 - 5119427 | 13546.4 |
| parb/repb/spo0j family partition protein | E0E99_25460 | Not Available | Positive | 5119496 - 5121514 | 74791.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

