Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin ompc | E0E99_25365 | Not Available | Negative | 5102620 - 5103744 | 40956.7 |
| galactoside o-acetyltransferase | E0E99_25370 | Not Available | Negative | 5103911 - 5104491 | 21458.9 |
| mfs transporter | E0E99_25375 | Not Available | Negative | 5104520 - 5105773 | 46439.8 |
| beta-galactosidase | E0E99_25380 | Not Available | Negative | 5105825 - 5108908 | 116708.0 |
| laci family dna-binding transcriptional regulator | E0E99_25385 | Not Available | Negative | 5109030 - 5110112 | 38801.8 |
| class i sam-dependent methyltransferase | E0E99_25390 | Not Available | Positive | 5110223 - 5110885 | 24551.0 |
| helix-turn-helix domain-containing protein | E0E99_25395 | Not Available | Negative | 5110882 - 5111832 | 35381.2 |
| mbl fold metallo-hydrolase | E0E99_25400 | Not Available | Negative | 5111851 - 5112627 | 28560.2 |
| duf2543 family protein | E0E99_25405 | Not Available | Positive | 5113005 - 5113250 | 9311.65 |
| cold shock domain-containing protein | E0E99_25410 | Not Available | Positive | 5113337 - 5113813 | 17752.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

