Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose/maltodextrin abc transporter substrate-binding protein male | E0E99_25295 | Not Available | Positive | 5086789 - 5087979 | 43269.9 |
| maltose abc transporter permease malf | E0E99_25300 | Not Available | Positive | 5088111 - 5089655 | 56901.6 |
| maltose abc transporter permease malg | E0E99_25305 | Not Available | Positive | 5089670 - 5090560 | 32258.4 |
| diguanylate cyclase | E0E99_25320 | Not Available | Negative | 5092599 - 5093831 | 46370.1 |
| chemoreceptor protein | E0E99_25330 | Not Available | Positive | 5096425 - 5097534 | 40049.1 |
| zinc transporter zntb | E0E99_25335 | Not Available | Positive | 5097689 - 5098672 | 36740.5 |
| atp-dependent rna helicase dbpa | E0E99_25345 | Not Available | Positive | 5099144 - 5100517 | 49181.7 |
| trna 2-thiocytidine(32) synthetase ttca | E0E99_25350 | Not Available | Negative | 5100611 - 5101546 | 35390.7 |
| universal stress protein uspf | E0E99_25355 | Not Available | Negative | 5101745 - 5102179 | 15804.2 |
| ktsc domain-containing protein | E0E99_25360 | Not Available | Negative | 5102261 - 5102473 | 8072.78 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

