Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase | E0E99_25245 | Not Available | Positive | 5075600 - 5076601 | 35917.0 |
| class i fumarate hydratase | E0E99_25250 | Not Available | Positive | 5076662 - 5078314 | 59896.5 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E0E99_25255 | Not Available | Positive | 5078324 - 5078926 | 22251.4 |
| lysr family transcriptional regulator | E0E99_25260 | Not Available | Negative | 5079009 - 5079911 | 34426.6 |
| fimbrial-like protein | E0E99_25265 | Not Available | Negative | 5079971 - 5080534 | 19336.8 |
| 4-hydroxybenzoate octaprenyltransferase | E0E99_25270 | Not Available | Negative | 5081260 - 5082132 | 32511.7 |
| chorismate lyase | E0E99_25275 | Not Available | Negative | 5082146 - 5082643 | 18781.9 |
| maltose operon protein malm | E0E99_25280 | Not Available | Negative | 5082824 - 5083771 | 32688.2 |
| maltoporin | E0E99_25285 | Not Available | Negative | 5083885 - 5085240 | 50220.1 |
| maltose/maltodextrin abc transporter atp-binding protein malk | E0E99_25290 | Not Available | Negative | 5085319 - 5086428 | 40768.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

