Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization microcompartment protein pdub | E0E99_25145 | Not Available | Negative | 5053769 - 5054584 | 27683.2 |
| propanediol utilization microcompartment protein pdua | E0E99_25150 | Not Available | Negative | 5054584 - 5054883 | 10063.3 |
| recombinase family protein | E0E99_25155 | Not Available | Positive | 5055231 - 5055788 | 20881.3 |
| pts fructose transporter subunit iibc | E0E99_25160 | Not Available | Positive | 5055936 - 5057573 | 55784.3 |
| anaerobic c4-dicarboxylate transporter | E0E99_25165 | Not Available | Negative | 5057659 - 5058957 | 45041.8 |
| amino acid racemase | E0E99_25170 | Not Available | Negative | 5059033 - 5059752 | 26205.9 |
| hypochlorite stress dna-binding transcriptional regulator hypt | E0E99_25175 | Not Available | Positive | 5060102 - 5061013 | 34498.7 |
| pseudouridine kinase | E0E99_25180 | Not Available | Positive | 5061316 - 5062257 | 33651.1 |
| pseudouridine-5'-phosphate glycosidase | E0E99_25185 | Not Available | Positive | 5062245 - 5063180 | 33017.0 |
| nupc/nupg family nucleoside cnt transporter | E0E99_25190 | Not Available | Positive | 5063277 - 5064527 | 43508.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

