Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | E0E99_25045 | Not Available | Positive | 5034935 - 5035474 | 20153.9 |
| lysozyme | E0E99_25050 | Not Available | Positive | 5035561 - 5035911 | 13133.7 |
| response regulator transcription factor | E0E99_25055 | Not Available | Negative | 5035930 - 5036532 | 22424.2 |
| eal domain-containing protein | E0E99_25060 | Not Available | Negative | 5036896 - 5037744 | 31677.6 |
| helix-turn-helix domain-containing protein | E0E99_25065 | Not Available | Negative | 5037944 - 5038384 | 17169.9 |
| sdr family oxidoreductase | E0E99_25070 | Not Available | Negative | 5038907 - 5039665 | 27030.4 |
| lysr family transcriptional regulator | E0E99_25075 | Not Available | Positive | 5039785 - 5040684 | 33388.5 |
| inner membrane protein yhjd | E0E99_25080 | Not Available | Positive | 5040732 - 5041757 | 38408.4 |
| arac family transcriptional regulator | E0E99_25085 | Not Available | Negative | 5042327 - 5043187 | 32753.2 |
| iron-containing alcohol dehydrogenase | E0E99_25090 | Not Available | Negative | 5043547 - 5044659 | 39488.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

