Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | E0E99_24980 | Not Available | Positive | 5021557 - 5022567 | 37064.9 |
| arsr family transcriptional regulator | E0E99_24985 | Not Available | Positive | 5022613 - 5022975 | 13497.2 |
| hypothetical protein | E0E99_24990 | Not Available | Negative | 5023360 - 5023608 | 9493.5 |
| aaa family atpase | E0E99_25000 | Not Available | Negative | 5023889 - 5026027 | 80126.6 |
| hypothetical protein | E0E99_25010 | Not Available | Positive | 5027304 - 5027930 | 23610.2 |
| hypothetical protein | E0E99_25020 | Not Available | Negative | 5028460 - 5028654 | 7443.91 |
| hypothetical protein | E0E99_25025 | Not Available | Positive | 5028846 - 5029568 | 26237.3 |
| c-type cytochrome | E0E99_25030 | Not Available | Negative | 5029679 - 5031073 | 51448.1 |
| alpha,alpha-trehalase tref | E0E99_25035 | Not Available | Positive | 5031501 - 5033150 | 63486.6 |
| hypothetical protein | E0E99_25040 | Not Available | Negative | 5033178 - 5034767 | 60539.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

