Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_24875 | Not Available | Positive | 4987895 - 4988248 | 12469.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E0E99_24880 | Not Available | Positive | 4988249 - 4988779 | 19740.9 |
| pts-dependent dihydroxyacetone kinase operon transcriptional regulator dhar | E0E99_24885 | Not Available | Negative | 4988757 - 4990682 | 71366.6 |
| glycerol dehydrogenase | E0E99_24890 | Not Available | Negative | 4990772 - 4991869 | 38983.1 |
| hypothetical protein | E0E99_24895 | Not Available | Negative | 4991928 - 4992152 | 8452.48 |
| dihydroxyacetone kinase | E0E99_24900 | Not Available | Positive | 4992430 - 4992708 | 9930.73 |
| glycerol dehydrogenase | E0E99_24905 | Not Available | Negative | 4992898 - 4993995 | 38859.9 |
| dihydroxyacetone kinase subunit dhak | E0E99_24910 | Not Available | Positive | 4994552 - 4995622 | 38123.5 |
| dihydroxyacetone kinase adp-binding subunit dhal | E0E99_24915 | Not Available | Positive | 4995633 - 4996265 | 22791.3 |
| dihydroxyacetone kinase subunit dham | E0E99_24920 | Not Available | Positive | 4996276 - 4997694 | 50321.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

