Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | E0E99_24825 | Not Available | Negative | 4975790 - 4976872 | 40548.6 |
| glutamyl-trna reductase | E0E99_24830 | Not Available | Negative | 4976914 - 4978170 | 46180.2 |
| lipoprotein localization protein lolb | E0E99_24835 | Not Available | Positive | 4978382 - 4979005 | 23525.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | E0E99_24840 | Not Available | Positive | 4979002 - 4979853 | 30842.2 |
| ribose-phosphate pyrophosphokinase | E0E99_24845 | Not Available | Positive | 4980120 - 4981067 | 34218.3 |
| c4-dicarboxylic acid transporter daua | E0E99_24850 | Not Available | Positive | 4981192 - 4982874 | 59489.7 |
| aspartate aminotransferase family protein | E0E99_24855 | Not Available | Negative | 4982995 - 4984458 | 53139.6 |
| diaminobutyrate--2-oxoglutarate transaminase | E0E99_24860 | Not Available | Negative | 4984474 - 4985859 | 49635.2 |
| heme-binding protein | E0E99_24865 | Not Available | Positive | 4986264 - 4986692 | 15031.4 |
| iron-containing alcohol dehydrogenase | E0E99_24870 | Not Available | Positive | 4986715 - 4987878 | 41450.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

