Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-binding protein crl | E0E99_24775 | Not Available | Positive | 4966015 - 4966416 | 15566.6 |
| phosphoporin phoe | E0E99_24780 | Not Available | Negative | 4966472 - 4967527 | 38866.9 |
| glutamate 5-kinase | E0E99_24785 | Not Available | Positive | 4967818 - 4968921 | 39072.9 |
| glutamate-5-semialdehyde dehydrogenase | E0E99_24790 | Not Available | Positive | 4968933 - 4970186 | 44629.7 |
| crp/fnr family transcriptional regulator | E0E99_24795 | Not Available | Positive | 4970457 - 4971176 | 27097.9 |
| sodium-potassium/proton antiporter chaa | E0E99_24800 | Not Available | Positive | 4971667 - 4972767 | 39215.9 |
| 3-deoxy-8-phosphooctulonate synthase | E0E99_24805 | Not Available | Negative | 4972866 - 4973720 | 30754.2 |
| tetratricopeptide repeat-containing protein | E0E99_24810 | Not Available | Negative | 4973756 - 4974565 | 30817.9 |
| sirb family protein | E0E99_24815 | Not Available | Negative | 4974568 - 4974960 | 14674.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | E0E99_24820 | Not Available | Negative | 4974957 - 4975790 | 30667.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

