Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4760 domain-containing protein | E0E99_24715 | Not Available | Negative | 4955074 - 4955568 | 18729.8 |
| lexa family transcriptional regulator | E0E99_24720 | Not Available | Negative | 4956079 - 4956468 | 14349.0 |
| peptidoglycan endopeptidase | E0E99_24735 | Not Available | Positive | 4957171 - 4957932 | 28951.5 |
| flagellar type iii secretion system protein flha | E0E99_24740 | Not Available | Negative | 4957970 - 4959691 | 62642.5 |
| putative lateral flagellar export/assembly protein lafu | E0E99_24745 | Not Available | Positive | 4959675 - 4960514 | 30921.3 |
| dna primase | E0E99_24750 | Not Available | Positive | 4960571 - 4961212 | 24730.7 |
| dna polymerase iv | E0E99_24755 | Not Available | Positive | 4961279 - 4962334 | 39611.2 |
| cytosol nonspecific dipeptidase | E0E99_24760 | Not Available | Negative | 4962435 - 4963892 | 52701.1 |
| xanthine phosphoribosyltransferase | E0E99_24765 | Not Available | Positive | 4964154 - 4964612 | 16956.6 |
| esterase frsa | E0E99_24770 | Not Available | Positive | 4964713 - 4965957 | 46922.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

