Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease xni | E0E99_24600 | Not Available | Negative | 4934238 - 4934993 | 28282.9 |
| l-serine ammonia-lyase | E0E99_24605 | Not Available | Negative | 4935160 - 4936527 | 48807.9 |
| haaap family serine/threonine permease | E0E99_24610 | Not Available | Negative | 4936581 - 4937870 | 46892.2 |
| nucleotide 5'-monophosphate nucleosidase | E0E99_24615 | Not Available | Negative | 4938431 - 4939795 | 50860.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | E0E99_24620 | Not Available | Negative | 4939908 - 4940756 | 32497.0 |
| secy-interacting protein | E0E99_24625 | Not Available | Positive | 4940825 - 4941370 | 20420.2 |
| is110 family transposase | E0E99_24630 | Not Available | Positive | 4941453 - 4941626 | 6355.24 |
| duf4326 domain-containing protein | E0E99_24640 | Not Available | Negative | 4942689 - 4943279 | 22813.1 |
| duf488 domain-containing protein | E0E99_24645 | Not Available | Negative | 4943276 - 4943713 | 17036.6 |
| hypothetical protein | E0E99_24650 | Not Available | Negative | 4943710 - 4944372 | 25168.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

