Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3302 domain-containing protein | E0E99_24550 | Not Available | Positive | 4923324 - 4923647 | 12307.2 |
| hlyd family secretion protein | E0E99_24555 | Not Available | Positive | 4923653 - 4924789 | 41691.4 |
| lysr family transcriptional regulator | E0E99_24560 | Not Available | Negative | 4924797 - 4925759 | 36394.6 |
| sugar abc transporter atp-binding protein | E0E99_24565 | Not Available | Positive | 4925987 - 4927486 | 55202.9 |
| abc transporter permease | E0E99_24570 | Not Available | Positive | 4927490 - 4928473 | 34526.9 |
| laci family transcriptional regulator | E0E99_24575 | Not Available | Positive | 4928547 - 4929497 | 33519.2 |
| sugar kinase | E0E99_24580 | Not Available | Positive | 4929551 - 4931131 | 56711.4 |
| laci family dna-binding transcriptional regulator | E0E99_24585 | Not Available | Positive | 4931198 - 4932196 | 37477.9 |
| l-fuculose-phosphate aldolase | E0E99_24590 | Not Available | Positive | 4932338 - 4932985 | 23881.8 |
| lactaldehyde reductase | E0E99_24595 | Not Available | Positive | 4933013 - 4934161 | 40547.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

