Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6--l-glutamate ligase | E0E99_01170 | Not Available | Negative | 246588 - 247490 | 32539.7 |
| nitroreductase nfsa | E0E99_01175 | Not Available | Negative | 247550 - 248272 | 26763.0 |
| duf1418 family protein | E0E99_01180 | Not Available | Negative | 248256 - 248546 | 10498.4 |
| glutaredoxin, grxa family | E0E99_01185 | Not Available | Positive | 248719 - 248982 | 9836.72 |
| hypothetical protein | E0E99_01190 | Not Available | Negative | 249017 - 249397 | 14212.0 |
| transporter | E0E99_01195 | Not Available | Positive | 249667 - 251352 | 60132.7 |
| bcr/cfla family efflux mfs transporter | E0E99_01200 | Not Available | Positive | 251867 - 253078 | 44607.3 |
| sdr family oxidoreductase | E0E99_01205 | Not Available | Positive | 253243 - 254040 | 27296.0 |
| dmt family transporter | E0E99_01210 | Not Available | Negative | 254053 - 254967 | 33327.7 |
| lysr family transcriptional regulator | E0E99_01215 | Not Available | Positive | 255070 - 255984 | 34805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

