Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | E0E99_24450 | Not Available | Negative | 4902696 - 4903238 | 19345.8 |
| fimbrial protein | E0E99_24455 | Not Available | Negative | 4903248 - 4904312 | 38196.9 |
| type 1 fimbrial protein | E0E99_24460 | Not Available | Negative | 4904309 - 4904914 | 22056.7 |
| molecular chaperone | E0E99_24465 | Not Available | Negative | 4904927 - 4905703 | 28501.5 |
| papc/fimd family outer membrane usher protein | E0E99_24470 | Not Available | Negative | 4905730 - 4908201 | 91312.5 |
| type 1 fimbrial protein | E0E99_24475 | Not Available | Negative | 4908243 - 4908791 | 20159.8 |
| type 1 fimbrial protein | E0E99_24480 | Not Available | Negative | 4908861 - 4909409 | 18878.1 |
| is3 family transposase | E0E99_24485 | Not Available | Positive | 4909761 - 4909933 | 6502.71 |
| hypothetical protein | E0E99_24490 | Not Available | Positive | 4910006 - 4910212 | 7977.5 |
| mltr family transcriptional regulator | E0E99_24495 | Not Available | Negative | 4910225 - 4910815 | 22158.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

