Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase arog | E0E99_24400 | Not Available | Positive | 4891762 - 4892814 | 37827.4 |
| hypothetical protein | E0E99_24405 | Not Available | Positive | 4892961 - 4893701 | 28036.5 |
| murein l,d-transpeptidase | E0E99_24410 | Not Available | Positive | 4893967 - 4894707 | 27998.6 |
| class ii glutamine amidotransferase | E0E99_24415 | Not Available | Negative | 4894678 - 4895445 | 28565.1 |
| d-sedoheptulose 7-phosphate isomerase | E0E99_24420 | Not Available | Negative | 4895557 - 4896138 | 20939.1 |
| acyl-coa dehydrogenase | E0E99_24425 | Not Available | Positive | 4896378 - 4898822 | 89206.7 |
| amidohydrolase | E0E99_24430 | Not Available | Positive | 4898933 - 4899700 | 29126.6 |
| hypothetical protein | E0E99_24435 | Not Available | Positive | 4899880 - 4900290 | 15264.3 |
| eal domain-containing protein | E0E99_24440 | Not Available | Negative | 4900306 - 4901025 | 27636.9 |
| o-antigen ligase domain-containing protein | E0E99_24445 | Not Available | Negative | 4901027 - 4902694 | 62252.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

