Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i ubiquinol oxidase subunit cyda | E0E99_24300 | Not Available | Positive | 4878167 - 4879735 | 58385.6 |
| cytochrome d ubiquinol oxidase subunit ii | E0E99_24305 | Not Available | Positive | 4879751 - 4880890 | 42286.4 |
| cytochrome bd-i oxidase subunit cydx | E0E99_24310 | Not Available | Positive | 4880905 - 4881018 | 4013.84 |
| cyd operon protein ybge | E0E99_24315 | Not Available | Positive | 4881018 - 4881311 | 10990.9 |
| acyl-coa thioesterase ybgc | E0E99_24320 | Not Available | Positive | 4881462 - 4881866 | 15556.9 |
| tol-pal system protein tolq | E0E99_24325 | Not Available | Positive | 4881863 - 4882555 | 25572.2 |
| colicin uptake protein tolr | E0E99_24330 | Not Available | Positive | 4882559 - 4882987 | 15441.9 |
| cell envelope integrity protein tola | E0E99_24335 | Not Available | Positive | 4883052 - 4884308 | 42560.6 |
| tol-pal system protein tolb | E0E99_24340 | Not Available | Positive | 4884437 - 4885729 | 46034.2 |
| peptidoglycan-associated lipoprotein pal | E0E99_24345 | Not Available | Positive | 4885764 - 4886282 | 18668.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

