Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | E0E99_24150 | Not Available | Negative | 4831837 - 4832490 | 23364.9 |
| accessory factor ubik family protein | E0E99_24155 | Not Available | Positive | 4832880 - 4833176 | 11391.7 |
| cell surface composition regulator glgs | E0E99_24160 | Not Available | Negative | 4833209 - 4833415 | 8078.6 |
| duf1449 family protein | E0E99_24165 | Not Available | Positive | 4833676 - 4834305 | 22903.1 |
| flotillin family protein | E0E99_24170 | Not Available | Positive | 4834329 - 4835996 | 61040.6 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | E0E99_24175 | Not Available | Negative | 4836089 - 4837522 | 50993.4 |
| bifunctional | E0E99_24180 | Not Available | Negative | 4837582 - 4840422 | 108566.0 |
| inorganic triphosphatase | E0E99_24185 | Not Available | Negative | 4840548 - 4841849 | 48155.8 |
| sh3 domain-containing protein | E0E99_24190 | Not Available | Positive | 4842091 - 4842711 | 23124.9 |
| multifunctional cca addition/repair protein | E0E99_24195 | Not Available | Positive | 4842773 - 4844014 | 46374.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

