Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_24100 | Not Available | Negative | 4822434 - 4822661 | 8402.03 |
| hypothetical protein | E0E99_24105 | Not Available | Negative | 4822980 - 4823378 | 14688.2 |
| hypothetical protein | E0E99_24110 | Not Available | Negative | 4823400 - 4823717 | 12216.6 |
| hypothetical protein | E0E99_24115 | Not Available | Negative | 4823805 - 4824290 | 17841.6 |
| repa protein | E0E99_24120 | Not Available | Negative | 4824701 - 4825567 | 32743.5 |
| hypothetical protein | E0E99_24125 | Not Available | Negative | 4826140 - 4826388 | 9187.94 |
| repb family plasmid replication initiator protein | E0E99_24130 | Not Available | Positive | 4827350 - 4828432 | 40555.2 |
| aryl-sulfate sulfotransferase | E0E99_24135 | Not Available | Positive | 4828580 - 4830376 | 66714.0 |
| thiol:disulfide interchange protein dsba/dsbl | E0E99_24140 | Not Available | Positive | 4830400 - 4831068 | 24392.2 |
| protein-disulfide oxidoreductase dsbi | E0E99_24145 | Not Available | Positive | 4831083 - 4831754 | 25325.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

