Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf87 domain-containing protein | E0E99_24050 | Not Available | Positive | 4813306 - 4815372 | 77277.1 |
| hypothetical protein | E0E99_24055 | Not Available | Positive | 4815877 - 4816374 | 18836.3 |
| hypothetical protein | E0E99_24060 | Not Available | Negative | 4816411 - 4816662 | 9129.57 |
| hypothetical protein | E0E99_24065 | Not Available | Negative | 4816763 - 4816969 | 7416.3 |
| hypothetical protein | E0E99_24070 | Not Available | Positive | 4817384 - 4817683 | 12002.3 |
| hnh endonuclease | E0E99_24075 | Not Available | Negative | 4817799 - 4819412 | 60552.4 |
| hypothetical protein | E0E99_24080 | Not Available | Negative | 4819988 - 4820209 | 7893.58 |
| hypothetical protein | E0E99_24085 | Not Available | Negative | 4820470 - 4820688 | 8859.16 |
| hypothetical protein | E0E99_24090 | Not Available | Positive | 4820971 - 4821294 | 12053.2 |
| hypothetical protein | E0E99_24095 | Not Available | Negative | 4821330 - 4822253 | 35904.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

