Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | E0E99_23995 | Not Available | Negative | 4803438 - 4804742 | 46227.0 |
| atp phosphoribosyltransferase | E0E99_24000 | Not Available | Negative | 4804748 - 4805647 | 33206.6 |
| his operon leader peptide | E0E99_24005 | Not Available | Negative | 4805791 - 4805838 | 1916.22 |
| sdr family oxidoreductase | E0E99_24010 | Not Available | Positive | 4806013 - 4806837 | 29693.9 |
| lysr family transcriptional regulator | E0E99_24015 | Not Available | Positive | 4806879 - 4807808 | 34243.2 |
| membrane protein yoei | E0E99_24020 | Not Available | Positive | 4808026 - 4808088 | 2176.61 |
| apc family permease | E0E99_24025 | Not Available | Positive | 4808078 - 4809439 | 49653.6 |
| exodeoxyribonuclease i | E0E99_24030 | Not Available | Negative | 4809499 - 4810923 | 54327.2 |
| dde domain-containing protein | E0E99_24035 | Not Available | Positive | 4811103 - 4811384 | 10552.0 |
| hypothetical protein | E0E99_24045 | Not Available | Positive | 4811918 - 4813309 | 51741.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

