Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | E0E99_01115 | Not Available | Positive | 237386 - 238246 | 31041.7 |
| isochorismatase family protein | E0E99_01120 | Not Available | Positive | 238263 - 238940 | 24125.0 |
| Trna-ser | Not Available | Not Available | Positive | 239090 - 239177 | Not Available |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | E0E99_01135 | Not Available | Negative | 239681 - 240808 | 42032.1 |
| duf2593 family protein | E0E99_01140 | Not Available | Negative | 240850 - 241338 | 18521.2 |
| putrescine abc transporter permease poti | E0E99_01145 | Not Available | Negative | 241398 - 242243 | 30634.5 |
| putrescine abc transporter permease poth | E0E99_01150 | Not Available | Negative | 242240 - 243193 | 35582.7 |
| putrescine abc transporter atp-binding subunit potg | E0E99_01155 | Not Available | Negative | 243203 - 244336 | 42091.5 |
| spermidine/putrescine abc transporter substrate-binding protein potf | E0E99_01160 | Not Available | Negative | 244475 - 245587 | 40768.6 |
| ybjn domain-containing protein | E0E99_01165 | Not Available | Negative | 246021 - 246497 | 17534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

